古莉冰1,朱玉兰1,徐媛1,孙杰1,王佃鹏2,董瑞玲1
1.深圳国际旅行卫生保健中心,广东 深圳 518033;2.深圳市职业病防治院
摘要:目的建立一种检测丙型肝炎病毒(HCV)核心蛋白基因的巢式RT-PCR方法,以及HCV核心蛋白基因区测序分型方法。方法从国际HCV数据库查找HCV核心蛋白基因序列,设计HCVRNA巢式RT-PCR引物及测序引物,并建立巢式RT-PCR反应体系。采用出入境人员抗-HCV阳性血清60份,及50份标本为HCV抗体检测阴性,且谷丙转氨酶(ALT)>100U/L的血清进行巢式RT-PCR检测,阳性结果使用本研究建立的测序引物进行基因测序以确定HCV基因型。结果60份抗-HCV阳性血清中,42份(70.0%)核心蛋白基因RT-PCR扩增阳性,其中1b型27例、1a型12例、6a型1例、3a型1例、2a型1例。50份ALT>100U/L且抗-HCV阴性标本中,1份HCV核心蛋白基因RT-PCR扩增阳性,测序鉴定为3a型。结论 本研究建立了一种HCVRNA核心蛋白基因的巢式RT-PCR检测和分型方法,为出入境人员HCV的诊断和监测提供重要依据。
关键词:丙型肝炎病毒;核心蛋白基因;巢式RT-PCR;基因分型
中图分类号:R512.6 文献标识码:B
A nested RT-PCR method of HCV RNA coreprotein gene testing and genotyping for entry-exit people
GU Li-bing*, ZHU Yu-lan, XU Yuan, SUN Jie,WANG Dian-peng, DONG Rui-ling
*Shenzhen International Travel HealthcareCenter, Shenzhen, Guangdong 518033, China
Abstract: Objective To establish a method of nested RT-PCR to test HCV core proteingene and genotype. Methods HCV core protein genesequence was searched from the Hepatitis C Virus (HCV) Database andHCV gene premier was designed for nested RT-PCR reaction system andgenotyping. A total of 60 anti-HCV positive serum,50 anti-HCVnegative and alanine aminotransferase (ALT) higher than 100U/Lserum from entry-exit people were tested. Sequencing the RT-PCRreactive products for HCV genotype. Results From60 anti-HCV positive serum,42(70%) were HCV core protein genepositive, including 27 1b genotype, 12 1a genotype, 1 for 6a, 3a,and 2a genotype. For 50 anti-HCV negative and ALT higher than 100U/L serum, 1 was 3a genotype. Conclusion Thisstudy established a quick and accurate method to test HCV coreprotein gene and genotype.
Key words: Hepatitis C Virus;Core protein gene; Nested RT-PCR; Genotyping
《中国国境卫生检疫杂志》